Position
| Chromosome | chr12 |
| Start | 13641709 |
| End | 13660019 |
| Strand | + |
view in Gbrowse: chr12:13641709..13660019
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|
| XP_028040234.1 | ATP-binding cassette sub-family G member 4 | 0.0 | 1139 |
ORF sequence (1656 bp)
ATGGGTCCCTCCGGTGCTGGTAAATCGACACTTCTGGATGTTCTATCCGGATATCGTATCACGGGCGTCGGCGGTGTTGTCCACGTGAACGGAAGAGGCAGGAACATGAAAAGATTCAAGAAGATGTCGTGTTACATACAGCAAGACGACCGCCTGCAGGGACTACTGACTGTCTCAGAGAACATGGTATTGGCTTCCGATCTTAAGCTCTCCATCAAAATGGACAAATACGAAAAAGGAGAAGTGATCGAAGACATATTAACTGCACTGGGTCTGTACGAGCATATGAGCACGCGTGCGTCCCGCCTCTCGGGTGGACAGAAGAAGAGGCTCTCCATCGCTCTGGAGCTGATCAACAATCCCCTCGTTATGTTCCTCGACGAACCAACAACTGGTCTGGACAGCTCCTCGTGTAGTCAAGTAGTCAAGCTCTGCAGGGATCTGGCGCAGCAGGGTCGTACCATAGTCTGTACGGTACATCAACCCTCAGCGTCACTGTTTGCCCTATTCGATCAAGTATACGTTTTAGCTGCAGGAAATTGCCTCTACCAGGGCACCACAAAGAACTTAGTACCATACTTGGAGGGGGCCGGAGTACCGTGCCCTATATACCACAATCCAGCTGATTACATTATCGAATTGGCTTGCGGAGAATACGGTGAAGACAAGATCCAAATCCTAACGACAAAAGCTGAAAACGGACGAGCACTTTCCTGGTTCGACGATCCTGACTCCATGCCCACTATGGAAGTCTTAAGAAAGCAGTGTCCTCTTAGCGTCTTAAAGGAGCAAGACCCTAGTACTGGCAACGAAGAAACTCCTAGATCCAATCAAAGAAAAGTACTTATTAAAAGAGGATTCTTAAAAGCAAAACGCGACTCCACAATGACCCATCTCCGGCTAATAGTGAACGTGTTAGTGGGAGTTATGTTGGGGAGTTTATTTATCAAGGCCGGTAACGAAGGCTCCAGAGTCTTGGAGAACTACAATCTGCTGTTTGCGATACTAATGCACCACATGATGTCGCCAATGATGCTTACCATACTCACTTTTCCGTCGGAAATGTCCATATTATCAAAGGAGCACTTCAATAGATGGTACTCGTTGGGTTCCTATTACATCTCTATTACAATTGTCGATTTACCTATTACGATAGTATCTTGTGCGGTGTTCAGTGCGATAGTGTACACTATGTCTGGTCAGCCGATGGCGATCTCTCGGTTCGGGATGTTCTTCGCGATCTCCCTATACACGGTACTAGTGGCGCAGAGTTTCGGCCTCATGATCGGAGCCGTCTTCAACGTTGTTAACGGTACTTTCCTTGGCCCTACTTTGTCGGTACCGATGATGATGTTCGCGGGTTTCGGAGTGACTCTACGCGACCTCCCGCCGTACTTGTACTGGGGGTCATACGTCTCGTACTTGCGGTACGGATTGGAAGGATTCGTGGGCGCCATATACGGGTTGGAAAGACCGAAACTGGACTGCAATGAAGCACCTATATGCCTTTATAAATACCCAAGACAGTTCCTCTCTGAAGTAGCTATGTCTCCGGACAGATTCTGGTGGGACGTTCTAGCGCTCACGATCTTCGTCTTCGTGTTAAGGATTGCAGCTTTCTTCCTCCTAAAATGGAAGTTAAACGCTGTCCGATAA
Protein sequence (551 aa)
MGPSGAGKSTLLDVLSGYRITGVGGVVHVNGRGRNMKRFKKMSCYIQQDDRLQGLLTVSENMVLASDLKLSIKMDKYEKGEVIEDILTALGLYEHMSTRASRLSGGQKKRLSIALELINNPLVMFLDEPTTGLDSSSCSQVVKLCRDLAQQGRTIVCTVHQPSASLFALFDQVYVLAAGNCLYQGTTKNLVPYLEGAGVPCPIYHNPADYIIELACGEYGEDKIQILTTKAENGRALSWFDDPDSMPTMEVLRKQCPLSVLKEQDPSTGNEETPRSNQRKVLIKRGFLKAKRDSTMTHLRLIVNVLVGVMLGSLFIKAGNEGSRVLENYNLLFAILMHHMMSPMMLTILTFPSEMSILSKEHFNRWYSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFGLMIGAVFNVVNGTFLGPTLSVPMMMFAGFGVTLRDLPPYLYWGSYVSYLRYGLEGFVGAIYGLERPKLDCNEAPICLYKYPRQFLSEVAMSPDRFWWDVLALTIFVFVLRIAAFFLLKWKLNAVR
Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|
| Gene3D | 3.40.50.300 | - |
1 | 195 | 5.2e-47 |
- |
| PANTHER | PTHR19241 | - |
1 | 549 | 1.2e-263 |
- |
| PANTHER | PTHR19241:SF184 | - |
1 | 549 | 1.2e-263 |
- |
| Pfam | PF00005 | ABC transporter |
1 | 130 | 2.4e-22 |
IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. |
1 | 203 | 12.705 |
IPR003439 |
| SMART | SM00382 | - |
1 | 179 | 1.1e-05 |
IPR003593 |
| SUPERFAMILY | SSF52540 | - |
1 | 194 | 4.9e-40 |
IPR027417 |
| ProSitePatterns | PS00211 | ABC transporters family signature. |
103 | 117 | - |
IPR017871 |
| Pfam | PF01061 | ABC-2 type transporter |
278 | 486 | 1.4e-40 |
IPR013525 |
InterPro assignment
Gene ontology (GO) assignment