KWMTBOMO07167

Overview
Annotation
Orthologs
Expression
Expression (Log conversion of TPMs)

Position

Chromosome	Chr12
Start	6999419
End	7014576
Strand	+

view in Gbrowse: Chr12:6999419..7014576

Most similar sequence in NCBI nr database

Accession	Description	E-value	Score
XP_004929477.1	ATP-binding cassette sub-family G member 1 isoform X1	0.0	1248

ORF sequence (1818 bp)

ATGAACATCGAGATGGGAAGTGCGTCCCAGGAATGCGGACGAGTAAAGGCTATTACTTTTTTGGATTTGGGATACAAAACCACAAATGCGCAAGTTTCAGGATTTCCGCTATGTTTCAATCGTAAATCCAGTACAACCTTAACTATTATTAATGGAGCCTGTGGAGTGATAAGGCCAGGACGCCTAACCTTCATTCTTGGACCCTCCGGTGCTGGAAAAACCACTCTTCTCAAAATAATAGCCAAACGAAAAAGATCCGGAGTAACGGGTTCCGTTTTTGGTGCCAACCGTAACGTTGTTTTTGTAGATCAACACACCACCCTAATAGAAACACTTACCGCAAGAGAAACTATAAAGTTCGCCGCGAGCCTAAAACTGGCGAAAATGAACTACCGAGAACGTATACAAATGGTGGAATCAGTAACAAAACAGTTGGGCATTTACGACATTCTTAACACAAAGTGCAGTCGTCTTTCGGGTGGAGAAAGGAAAAGACTTACAATCGCCTGTGAATTATTAACAGACCCTCCGATTATGCTTCTTGATGAACCGACGAGCGGCCTTGATACAGTGTCGTCATTGTCTGTGGTTCGAGCGCTACAGACAGTGGCACGCACTGGACGGATCGTGGCCTGCGTGGTACACCAACCTTCCTCACAACTATACGCAACAGCAGACGATGTCCTATTATTGGCCAACGGAAAAACCCTTTATGCTGGGCCACTGAGAGATATTCCTGGGACACTATTAAAAGCTGGCTTATCATGTCCACAATATTATAACATGGCTGATTATTTATTAGAGGTCGCAAGTTTAAATCATCCATCCCATCAAATTCTTGAAAGTGAAGCACGGAGCTATGCTATTGAATTGAGAAAAAATACACAAATCGACATTTCAATAAAAAATGGAGAAGAATCCTCACCAGAATCTGAAGCCTTACTAAATCCGTATCCTGTTAAGGATTCGCATACGTACACCGCAAATTCATTACAACAATGTAAAGCGCTACTGTGGAGATGCTTCATTGGAGCCGTCAGAGACGTACACATAACTCAGATTAGACTGGCCACCCATCTCGTAGTGGCGCTATTGTTAGGTGCACTATACAACAAAGCTGGCCTGGAAGCACACAGAATTATATCTAATACTGGATGTTTGTTTTTCTTTCTACTATTCTTATTCTTCTCTAATGCTATGCCCACTATTCATACGTTTCCATCAGAATCAACAGTCGTTCTTCAGCAGCATATGAACAGATGGTACTCCTTAGTTCTTTATTGTGGTTCGAAGATTATAGTAGATCTACCCATACAACTCCTTTGTTCCACTGTGTTCCTAATTCCAGCATGGTACTTAACATCGCAACCTACAGACTTATTTAGAGTAGGAATGGCGTGGACAATATGCGTACTCATGACTATTCTGGCCCAAACATTTGGTTTGGTAGTCGGTGCTGCTTATGGAATGAAGCTCGGACTGTTCATCATTCCCGCTGCAAACATTCCGATGCTGATGTTCTCAGAGTTTTTCATTCCGTACAAGGAAATACCGTCGTACCTTCAACCGCTCTGCGTGATCTCTTACTTTCGTTACGGTTTCAATGCCTTCCTTAAAATAGTATACGGTTATGGAAGAGAAAAACTACCCTGTCATGTAGTATTTTGCATGTTTAAGAATCCAGCCAAATATCTAGAATATTTGGGGATCTCTGATAATGTGACTTATGATTTTCTTGCTTTAGTAATCTGGATTATTGTTTTACAGATTACCTTAGTTTTTGTTCTTATGTTTAAGGCATATAATGCGTGCAGATGA

Protein sequence (605 aa)

MNIEMGSASQECGRVKAITFLDLGYKTTNAQVSGFPLCFNRKSSTTLTIINGACGVIRPGRLTFILGPSGAGKTTLLKIIAKRKRSGVTGSVFGANRNVVFVDQHTTLIETLTARETIKFAASLKLAKMNYRERIQMVESVTKQLGIYDILNTKCSRLSGGERKRLTIACELLTDPPIMLLDEPTSGLDTVSSLSVVRALQTVARTGRIVACVVHQPSSQLYATADDVLLLANGKTLYAGPLRDIPGTLLKAGLSCPQYYNMADYLLEVASLNHPSHQILESEARSYAIELRKNTQIDISIKNGEESSPESEALLNPYPVKDSHTYTANSLQQCKALLWRCFIGAVRDVHITQIRLATHLVVALLLGALYNKAGLEAHRIISNTGCLFFFLLFLFFSNAMPTIHTFPSESTVVLQQHMNRWYSLVLYCGSKIIVDLPIQLLCSTVFLIPAWYLTSQPTDLFRVGMAWTICVLMTILAQTFGLVVGAAYGMKLGLFIIPAANIPMLMFSEFFIPYKEIPSYLQPLCVISYFRYGFNAFLKIVYGYGREKLPCHVVFCMFKNPAKYLEYLGISDNVTYDFLALVIWIIVLQITLVFVLMFKAYNACR

Corresponding sequences in KAIKObase version 1

BMgn010557

Domains and motifs

Database	ID	Description	Start	End	Evalue	InterPro ID
ProSiteProfiles	PS50893	ATP-binding cassette, ABC transporter-type domain profile.	18	258	18.221	IPR003439
Gene3D	3.40.50.300	-	37	285	1.4e-46	-
PANTHER	PTHR19241	-	46	592	0.0	-
PANTHER	PTHR19241:SF327	-	46	592	0.0	-
SUPERFAMILY	SSF52540	-	46	246	2.0e-42	IPR027417
Pfam	PF00005	ABC transporter	57	186	5.8e-22	IPR003439
SMART	SM00382	-	59	235	3.3e-08	IPR003593
ProSitePatterns	PS00211	ABC transporters family signature.	158	172	-	IPR017871
Pfam	PF01061	ABC-2 type transporter	332	541	2.9e-35	IPR013525

InterPro assignment

InterPro ID	InterPro description
IPR003439	ABC transporter-like
IPR003593	AAA+ ATPase domain
IPR013525	ABC-2 type transporter
IPR017871	ABC transporter, conserved site
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene ontology (GO) assignment

GO category	GO ID	GO description
molecular function	GO:0005524	ATP binding
cellular component	GO:0016020	membrane
molecular function	GO:0016887	ATPase activity

Species	Accession
Danaus plexippus	DPOGS209284
Heliconius melpomene	HMEL034740g1.t1 HMEL034740g1.t2
Manduca sexta	XP_030036328.1
Plutella xylostella	g9699.t1
Spodoptera frugiperda (corn)	GSSPFG00004538001.1-PA
Spodoptera frugiperda (rice)	SFRICE004801-PA
Acyrthosiphon pisum	-
Aedes aegypti	-
Anopheles gambiae	AGAP009467-PA
Apis mellifera	XP_006569621.1 XP_006569622.1 XP_026301938.1
Drosophila melanogaster	FBpp0077292 FBpp0077293 FBpp0077294 FBpp0294026
Tribolium castaneum	-
Homo sapiens	-
Mus musculus	-

The expression data was obtained from RNA-seq data of ten tissues/locations.
Three replicates were sequenced from each tissue/location.

The Y axis is the abundance value (transcripts per million (TPM))
The X axis is the tissues/locations with the following abbreviations:
ASG: anterior silk gland; FB: fat body; MG: midgut;
MSG_A: middle silk gland (anterior); MSG_M: middle silk gland (middle); MSG_P: middle silk gland (posterior);
MT: Malpighian tubules; OV: ovary; PSG: posterior silk gland; TT: testis

For more details, please refer to the article "Reference transcriptome data in silkworm Bombyx mori" (Yokoi et al., 2019).
Expression data (TPM) can be obtained from National Bioscience Database Center.

Expression data of KWMTBOMO07167:

Expression data of alternative splicing isoform(s) of KWMTBOMO07167:

MSTRG.3715.1 (position: Chr12:6991775..7018589)

MSTRG.3715.2 (position: Chr12:6999419..7020081)

MSTRG.3715.3 (position: Chr12:6999419..7018719)

MSTRG.3715.4 (position: Chr12:6999419..7018711)

MSTRG.3715.6 (position: Chr12:7006108..7012223)