Position
| Chromosome | chr12 |
| Start | 4081151 |
| End | 4150400 |
| Strand | - |
view in Gbrowse: chr12:4081151..4150400
Most similar sequence in NCBI nr database
| Accession | Description | E-value | Score |
|---|
| XP_004929563.1 | ATP-binding cassette sub-family G member 1 | 0.0 | 1397 |
ORF sequence (2034 bp)
ATGTCGAATATACCTTTAGTACGTCGGGCGATCGTTGGAGCAACTCTAGCCCATAATGCGCCAGGTCTTCAGTCGCCGGGTCAATCCAACTCACCGGTTGAACCTGACCCGATGATCGTCGAGGGGGGTCAAGAGAGCCAGTGGACCCCCGCCGCGTTAGAAAGGGTTGGGTCGACGTTGAAGGCTTTGAATCGTATGGCCAAACGACCACCTGTACATTTATTGTTCGAAGATGTCAACTACACCGTAAGCTCTCATAAGGGGGAGCAGAGAATACTTCAAAGCGTCTCCGGAGAGTTTCGTTCAGGAGAGCTGACATGTATACTAGGACCTTCGGGGGCTGGAAAGTCTACTTTACTCAACATCTTAGCAGGATACACGTTGAACGGCGTCACCGGACGTATATCAGTGAACGGACACGTGCGAGACATGAGGGTCTTCAAGAAGCTGAGCTCGTACATCATGCAGGATGATCTGCTGCAGCCAAGACTGACCGTGCAAGAGTCCATGTGGATCGCTGCTGATCTGAAACTCGGCAAGGAACTGGGAAAGCCGGAGAAGGAACTCATTATTGAAGAAATTCTACAAACACTAGGTCTGTGGGATCACAGAGACACAAGGTCTGAAAAACTGTCTGGAGGACAATCGAAACGTCTCACTGTCGCCCTGGAGCTGGTCAACAATCCACCCATCATATTTCTGGATGAGCCTACCACAGGTTTGGACATCGTGTCGATACGACAACTGGTAGTGCTTTTGCGGCTATTGTCAAGACAAGGAAGAACTATCATATGCACAATACACCAGCCCTCGGCTTCTCTGTTCGCTCTCTTCGACAGAGTGTATGTGATGGCGCGGGGAATGTGTTGTTATCAGGGCGCCGCTCCTCTTCTGGTACCGTATCTGTCAGAGCTGGGGCACACTTGCCCCACGACCCACAATCCAGCGGACTTCGTGCTGGAAACGATCATCACCGACGCGGAAGCAGCGGCTCAGATGTCGGAATTATGCCAGAATGGAAAACTTTGCAGGAAACTGGATAGGATGTTAGCGAGAGGTGGAAAGAAACCAATTTTACATTCAGACGAGTCAATACAAAGGATATTCGTCGAACACATAGCCAAAGAACAAATGCAGAAGATGGAATTTCCGACCACGTTTTTCACGCAATTCTATATCCTAACGAAAAGGATGTTCATACAAAACAAAAGAAATTTGACCACACTCTGGATACAGTTAGCGCACCATCTAACTTCAGCCATTCTTCTTGGAAGTATATTCTTCGGCATTGGTAACGACGGGGCCTATCCAGTAGTAAATTTTAAGTTCTGCATGAGCTGTTTGGTGTTTTTCATGTACACATATATAATGATACCGATATTGTTATTTCCGATGGAAGTGCACCTACTGCGTCGGGAATACTTCAATCGCTGGTACAGCTTAAAGGCTTATTATGCTGCGCTGAGTTTTGCCACTATGCCTGCGATGACTTTACTTGGCCTCATATTCCTGGTTATAACGTATTTCATGTCAGGGCAGCTGCTAGAGTGGGAGAGGTTTACATTGTTCTCTATCAGCGGACTGCTCACGGGAATATGTTCCGAGGGCTTAGGTCTCGCCATAGGCGCAGCACTGAGTGTTACTAACGGCTCTATCGTCGGACCATCGATAGTGTCACCACTCCTGGTTCTCTGCTGCTACGGAATGGGTTTCGGTCCTTACATAGAGGGCACCATGCGCGCCCTAATGTCCGCCTCGTATCTGCGTTACGGTCTTTCCGGATTAACTTTATCCCTGTTCGAAAACCGACGGCCAATGGACTGTTCATTAGAATTCTGTTTGTATTCCGATTCTAAGCTCCTACTGCGGGACGTGGGAATGACAAACGATCGATACTACATTCAAATAATAGGATTGTTGGCATTCACGTTCGTTTATCGATTGTTGGCGTATTTCGCTTTGAGGTATCGAATGACCGCAGATTTTTCTAATCGATTCATGTGTTACATTAGTAAATTTTTAAAGCATCGATAA
Protein sequence (677 aa)
MSNIPLVRRAIVGATLAHNAPGLQSPGQSNSPVEPDPMIVEGGQESQWTPAALERVGSTLKALNRMAKRPPVHLLFEDVNYTVSSHKGEQRILQSVSGEFRSGELTCILGPSGAGKSTLLNILAGYTLNGVTGRISVNGHVRDMRVFKKLSSYIMQDDLLQPRLTVQESMWIAADLKLGKELGKPEKELIIEEILQTLGLWDHRDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDIVSIRQLVVLLRLLSRQGRTIICTIHQPSASLFALFDRVYVMARGMCCYQGAAPLLVPYLSELGHTCPTTHNPADFVLETIITDAEAAAQMSELCQNGKLCRKLDRMLARGGKKPILHSDESIQRIFVEHIAKEQMQKMEFPTTFFTQFYILTKRMFIQNKRNLTTLWIQLAHHLTSAILLGSIFFGIGNDGAYPVVNFKFCMSCLVFFMYTYIMIPILLFPMEVHLLRREYFNRWYSLKAYYAALSFATMPAMTLLGLIFLVITYFMSGQLLEWERFTLFSISGLLTGICSEGLGLAIGAALSVTNGSIVGPSIVSPLLVLCCYGMGFGPYIEGTMRALMSASYLRYGLSGLTLSLFENRRPMDCSLEFCLYSDSKLLLRDVGMTNDRYYIQIIGLLAFTFVYRLLAYFALRYRMTADFSNRFMCYISKFLKHR
Domains and motifs
| Database | ID | Description | Start | End | Evalue | InterPro ID |
|---|
| PANTHER | PTHR19241 | - |
57 | 664 | 0.0 |
- |
| PANTHER | PTHR19241:SF499 | - |
57 | 664 | 0.0 |
- |
| SUPERFAMILY | SSF52540 | - |
69 | 317 | 1.4e-47 |
IPR027417 |
| CDD | cd03213 | ABCG_EPDR |
71 | 293 | 7.2e-71 |
- |
| Gene3D | 3.40.50.300 | - |
73 | 300 | 9.2e-56 |
- |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. |
74 | 311 | 18.167 |
IPR003439 |
| Pfam | PF00005 | ABC transporter |
93 | 238 | 1.6e-27 |
IPR003439 |
| SMART | SM00382 | - |
102 | 289 | 1.3e-14 |
IPR003593 |
| ProSitePatterns | PS00211 | ABC transporters family signature. |
211 | 225 | - |
IPR017871 |
| Pfam | PF01061 | ABC-2 type transporter |
389 | 600 | 1.2e-24 |
IPR013525 |
InterPro assignment
Gene ontology (GO) assignment